Research director at the CNRS and exploiter team leader. Theoretical evolutionary ecologist specialised in the study of infectious diseases, with a particular interest in human parasites such as HIV, HCV, malaria, ebola, HPV, or SARS-Cov-2.
Post-doctoral researcher working on the ANR CUPS2 project (menstrual products and women's health).
PhD candidate funded by dim1health on machine learning in phylodynamics (co-supervisor: Laurent Jacob).
PhD candidate funded by Sidaction on modelling HIV transmission in France using phylodynamics approaches (co-advisor: Laurence Meyer)).
ENS-Cahan-funded PhD candidate working on HPV ecology and evolution (co-supervisors: Nacho Bravo and Vincent Foulongne).
Stage de M2 du master IMaLiS sur on vaginal microbiota metagenomics.
ANRS-MIE-funded PhD candidate on modeling herpesvirus seroepidemiology in France (co-supervisors: Mircea Sofonea and Sonia Burrel).
FRM post-doctoral research fellow working on vaginal microbiota dynamics (2021-2024).
CNRS engineer in bioinformatics.
ENS biology internship on experimental immersion.
ATIP-Avenir-funded post-doctoral fellow (2012-2014) on virus evolutionary dynamics. Now a Research fellow in Edinburgh (UK).
ERC-funded Post-doctoral fellow on papillomavirus ecology and evolution (2015-2018). Now a researcher at Public Health Canada.
ERC-funded Post-doctoral fellow in biostatistics, genomics and epidemiology (2017-2019). Now senior post-doctoral fellow in Basel (Switzerland).
ANRS-MIE post-doctoral research fellow working on HPV immunology (2021-2023). Now post-doctoral fellow in Liège (Belgium).
Montpellier University-funded PhD candidate (2013-2017) in Viral phylodynamics (co-advisor: Olivier Gascuel). Now data scientist in in the private sector.
ENS-funded PhD candidate (2014-2017) on modelling multiple infections and virulence evolution (co-supervisor: Yannis Michalakis). Now Assistant Professor at the University of Montpellier.
FRM-funded PhD candidate (2017-2021) on phylodynamics of HIV and coinfecting viruses (co-supervisor: Marc Choisy). Now looking for a job in bioinformatics.
Montpellier University-funded PhD candidate (2017-2020) working on analysing codon usage preference (co-supervisor: Nacho Bravo). Currently a post-doctoral fellow with Étienne Simon-Lorière in Paris.
FHU-funded PhD candidate (2020-2023) on vaginal microbiota and viral infections (co-supervisors: Vincent Foulongne and Nicolas Tessandier). Currently advisor in the private sector.
LcC-funded PhD candidate (2019-2023) on modelling virus stochastic dynamics (co-supervisors: Mircea Sofonea and Christian Selinger). Currently looking for a post-doctoral opportunity.
Montpellier University-funded PhD candidate (2020-2023) working on modelling memory effects in epidemiology (co-supervisors: Christian Selinger and Mircea Sofonea). Currently looking for a post-doctoral opportunity.
MSc Student at ETH (2009) on modelling epidemics on networks (co-supervisor: Sebastian Bonhoeffer).
MEME MSc Student (2011-2012) on sex heterogeneity and the evolution of virulence.
MEME MSc Student (2011-2012) on the project modelling the evolution of resistance and tolerance (co-supervisor: Yannis Michalakis).
Chateaubriand fellowship (2011) on epidemiological modelling of plant pathogens (supervisor: Janic Antonovics).
MSA MSc Student (2012) on linking epidemiology and phylogenetics (co-supervisor: Olivier Gascuel).
MEME MSc Student (2014-2015) on modelling the evolution of drug resistance in HIV at the within- and between-host levels.
MEME MSc Student (2014) on the coevolution of immunosuppression and virulence.
MEME MSc Student (2015) on modelling ebola virus virulence evolution (co-supervisor: Mircea Sofonea).
MEME MSc Student (2015) on modelling virulence evolution in a heterogeneous environment (co-supervisor: Sébastien Lion).
BCD MSc student (2016) working on viral phylodynamics and the PANGEA contest (co-supervisor : Emma Saulnier).
MEME MSc student (2016) working on bioinformatics and virus genomics (co-supervisor : Nacho Bravo).
MEME MSc student (2016) working on modelling virulence evolution (co-supervisor : Mircea Sofonea).
MEME MSc student (2017) working on HPV diversity evolution (co-supervisor : Carmen Lía Murall).
B2E MSc student (2018) working on HPV epidemiology (co-supervisor: Nacho Bravo).
MODE MSc1 student (2019) on modelling coinfections and drug resistance (co-supervisors: Mircea Sofonea and Ramsès Djidjou-Demasse).
MD and Biology & Health MSc1 student (2019) on HPV infections in young women.
Physics and engineering of life MSc1 student (2019) on epidemics on networks (co-supervisor: Christian Selinger).
MDV MSc2 student (2019) on modelling HPV within-cell dynamics (co-supervisors: Mircea Sofonea and Christian Selinger).
Undergrad student (2019) on phylodynamics (co-supervisor: Gonché Danesh).
MEME MSc1 student (2020) working on modelling the evolution of the asymptomatic period.
EBE MSc2 (2020) working on memory effects in epidemiology (co-supervisor: Christian Selinger).
Intern from Télécom Paris working on analysing COVID-19 time series (co-supervisor: Christian Selinger).
Intern from ENS Cachan (2021) on PAPCLEAR clinical data analyses (co-supervisor: Nicolas Tessandier).
M1 internship from Lille University (2022) on phylodynamics and the PANGEA contest (co-supervisor: Gonché Danesh).
IMaLiS MSc internship on HPV within-host evolution (co-supervisor: Gonché Danesh).
ISPED MSc internship on COVID-19 epidemic waves analysis (co-supervisor: Olivier Supplisson).
Last year intership from IPSA working on modeling HPV infections.
Engineer in biology working on the EVOLPROOF project (2018-2023).
Engineer in data science working on COVID-19 (2020-2021). Now a PhD candidate in Toulouse.
Engineer on the EVOLPROOF project (2017-2018). Now a CNRS engineer at the IGF in Montpellier.
Technician in biology (2017-2018) on the EVOLPROOF project. Now working at ID.vet.
Computer scientist (2016) working on the EVOLPROOF project. Now working at GFI.
CNRS engineer in immunology and clinical researcher (2014-2020). Now working at CNRS MIVEGEC with Nacho Bravo.
TEC on the project EVOLPROOF (2018-2020). Now working at CHU Montpellier.
TRC on the project EVOLPROOF (2018-2020). Now working at CHU Montpellier.
Research engineer in computer sciences on the PEPS project (2012). Now at the CNRS in Strasbourg at the IGBMC.
MVA MSc internship on phylodynamics (main supervisor: Laurent Jacob).