Research director at the CNRS and exploiter team leader. Theoretical evolutionary ecologist specialised in the study of infectious diseases, with a particular interest in human parasites such as HIV, HCV, malaria, ebola, HPV, or SARS-Cov-2.
Research engineer in phylodynamics and genomics analyse sof human viruses.
MVA MSc internship on phylodynamics (main supervisor: Laurent Jacob).
PhD candidate funded by Sidaction on modelling HIV transmission in France using phylodynamics approaches.
Last year intership from IPSA working on modeling HPV infections.
LcC-funded PhD candidate from on modelling HPV cancer dynamics (co-advisors: Mircea Sofonea and Christian Selinger).
ENS-Cahan-funded PhD candidate working on HPV ecology and evolution (co-advisor: Nacho Bravo and Vincent Foulongne).
ANRS-MIE post-doctoral research fellow working on HPV immunology.
ANRS-MIE-funded PhD candidate on modeling herpesvirus seroepidemiology in France (co-advisors: Mircea Sofonea and Sonia Burrel).
Montpellier University-funded PhD candidate working on modelling vaccination policies in epidemiology (co-advisor: Christian Selinger and Mircea Sofonea).
FRM post-doctoral research fellow working on vaginal microbiota dynamics.
CNRS engineer in bioinformatics.
ATIP-Avenir-funded post-doctoral fellow (2012-2014) on virus evolutionary dynamics. Now a Research fellow in Edinburgh (UK).
ERC-funded Post-doctoral fellow on papillomavirus ecology and evolution (2015-2018). Now post-doctoral fellow in Montréal.
ERC-funded Post-doctoral fellow in biostatistics, genomics and epidemiology (2017-2019). Now IRD tenured researcher.
Montpellier University-funded PhD candidate (2013-2017) in Viral phylodynamics (co-advisor: Olivier Gascuel). Now data scientist in Toulouse (France).
ENS-funded PhD candidate (2014-2017) on modelling multiple infections and virulence evolution (co-advisor: Yannis Michalakis). Now Assistant Professor at the University of Montpellier.
FRM-funded PhD candidate (2017-2021) on phylodynamics of HIV and coinfecting viruses (co-advisor: Marc Choisy). Now a research engineer in the team in Montpellier.
Montpellier University-funded PhD candidate (2017-2020) working on analysing codon usage preference (main advisor: Nacho Bravo). Currently a post-doctoral fellow with Étienne Simon-Lorière in Paris.
FHU-funded PhD candidate (2020-2023) on vaginal microbiota and viral infections (co-advisors: Vincent Foulongne and Nicolas Tessandier).
MSc Student at ETH (2009) on modelling epidemics on networks (co-supervisor: Sebastian Bonhoeffer).
MEME MSc Student (2011-2012) on sex heterogeneity and the evolution of virulence.
MEME MSc Student (2011-2012) on the project modelling the evolution of resistance and tolerance (co-supervisor: Yannis Michalakis).
Chateaubriand fellowship (2011) on epidemiological modelling of plant pathogens (supervisor: Janic Antonovics).
MSA MSc Student (2012) on linking epidemiology and phylogenetics (co-supervisor: Olivier Gascuel).
MEME MSc Student (2014-2015) on modelling the evolution of drug resistance in HIV at the within- and between-host levels.
MEME MSc Student (2014) on the coevolution of immunosuppression and virulence.
MEME MSc Student (2015) on modelling ebola virus virulence evolution (co-supervisor: Mircea Sofonea).
MEME MSc Student (2015) on modelling virulence evolution in a heterogeneous environment (co-supervisor: Sébastien Lion).
BCD MSc student (2016) working on viral phylodynamics and the PANGEA contest (co-supervisor : Emma Saulnier).
MEME MSc student (2016) working on bioinformatics and virus genomics (co-supervisor : Nacho Bravo).
MEME MSc student (2016) working on modelling virulence evolution (co-supervisor : Mircea Sofonea).
MEME MSc student (2017) working on HPV diversity evolution (co-supervisor : Carmen Lía Murall).
B2E MSc student (2018) working on HPV epidemiology (co-supervisor: Nacho Bravo).
MODE MSc1 student (2019) on modelling coinfections and drug resistance (co-supervisors: Mircea Sofonea and Ramsès Djidjou-Demasse).
MD and Biology & Health MSc1 student (2019) on HPV infections in young women.
Physics and engineering of life MSc1 student (2019) on epidemics on networks (co-supervisor: Christian Selinger).
MDV MSc2 student (2019) on modelling HPV within-cell dynamics (co-supervisors: Mircea Sofonea and Christian Selinger).
Undergrad student (2019) on phylodynamics (co-supervisor: Gonché Danesh).
MEME MSc1 student (2020) working on modelling the evolution of the asymptomatic period.
EBE MSc2 (2020) working on memory effects in epidemiology (co-supervisor: Christian Selinger).
Intern from Télécom Paris working on analysing COVID-19 time series (co-supervisor: Christian Selinger).
Intern from ENS Cachan (2021) on PAPCLEAR clinical data analyses (co-supervisor: Nicolas Tessandier).
M1 internship from Lille University (2022) on phylodynamics and the PANGEA contest (co-supervisor: Gonché Danesh).
IMaLiS MSc internship on HPV within-host evolution (co-supervisor: Gonché Danesh).
ISPED MSc internship on COVID-19 epidemic waves analysis (co-supervisor: Olivier Supplisson).
Engineer in biology working on the EVOLPROOF project (2018-2023).
Engineer in data science working on COVID-19 (2020-2021). Now a PhD candidate in Toulouse.
Engineer on the EVOLPROOF project (2017-2018). Now a CNRS engineer at the IGF in Montpellier.
Technician in biology (2017-2018) on the EVOLPROOF project. Now working at ID.vet.
Computer scientist (2016) working on the EVOLPROOF project. Now working at GFI.
CNRS engineer in immunology and clinical researcher (2014-2020). Now working at CNRS MIVEGEC with Nacho Bravo.
TEC on the project EVOLPROOF (2018-2020). Now working at CHU Montpellier.
TRC on the project EVOLPROOF (2018-2020). Now working at CHU Montpellier.
Research engineer in computer sciences on the PEPS project (2012). Now at the CNRS in Strasbourg at the IGBMC.
